After my package has been installed, rpm-ostree indicates that changes will be applied at the next reboot. Indeed, rpm-ostree creates a new OSTree commit with the added package, but doesn’t modify the running system. This is an important step to guarantee update atomicity.
Даниил Иринин (Редактор отдела «Наука и техника»)
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But it is a little bit of extra complexity that most people don’t see.